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2019-03-01add tests fore accepting states and get_transition_idDaniel Friesel-0/+33
2019-03-01PTA.from_json: Only generate AnalyticFunction if it is setDaniel Friesel-2/+3
2019-02-22add ptalog to dfa benchmark generationDaniel Friesel-0/+11
2019-02-21update from_json / to_jsonDaniel Friesel-2/+3
2019-02-21add support for accepting statesDaniel Friesel-1/+9
2019-02-21dfs: always return tuplesDaniel Friesel-6/+6
2019-02-21generate-dfa-benchmark: Add sleep statements, handle interruptsDaniel Friesel-4/+15
2019-02-21PTA trace: Return transition objects, not just namesDaniel Friesel-16/+25
2019-02-21add generate-dfa-benchmark: trace-based benchmark generationDaniel Friesel-0/+46
2019-02-21PTA: Add argument support in trace generationDaniel Friesel-11/+42
2019-02-21support legacy argument / benchmark test value definitionsDaniel Friesel-3/+10
2019-02-21PTA: Add loader for legacy (dfatool.pl) JSON formatDaniel Friesel-0/+34
2019-02-21automata: .states -> .state (it's a dict)Daniel Friesel-15/+15
2019-02-21automata: Add support for benchmark arguments in DFSDaniel Friesel-10/+26
2019-02-20automata.py: Add documentationDaniel Friesel-4/+119
2019-02-19automata: Add type annotationsDaniel Friesel-77/+80
2019-02-18automata: Fix dfsDaniel Friesel-4/+4
2019-02-14do not print paramstats warning during crossvalidationDaniel Friesel-10/+20
2019-02-14update tests for get_param_lut fallback parameterDaniel Friesel-1/+3
2019-02-14improved cross-validation in analyze-archive; fallback for param_lut_modelDaniel Friesel-18/+44
2019-02-13add generic monte carlo cross validationDaniel Friesel-37/+172
2019-02-11document analyze-archiveDaniel Friesel-0/+58
2019-02-11protocol_benchmarks: Fix ManualJSON list of strings codegenDaniel Friesel-1/+1
2019-02-11derpDaniel Friesel-1/+1
2019-02-11cleanup, dokuDaniel Friesel-4/+38
2019-02-11add int value length (does int fit into 1/2/4 bytes?)Daniel Friesel-1/+17
2019-02-08update documentationDaniel Friesel-63/+92
2019-02-08fix eval-outlier-removal to account for not-so-recent PTAModel.assess changesDaniel Friesel-4/+6
2019-02-08Convert PTAModel to EnergyModel signatureDaniel Friesel-105/+318
outlier detection / removal is not supported at the moment.
2019-02-07AnalyticModel: Calculate by_param from by_nameDaniel Friesel-2/+23
2019-02-07WiPDaniel Friesel-5/+14
2019-02-07AnalyticModel DokuDaniel Friesel-3/+56
2019-02-07add generic AnalyticModel (just the basics without special cases)Daniel Friesel-2/+120
2019-02-07Rename EnergyModel to PTAModelDaniel Friesel-18/+73
2019-02-07Use ParallelParamFit class for parallel fittingDaniel Friesel-17/+39
2019-02-07function_powerset: add default for num_argsDaniel Friesel-1/+1
2019-02-07_try_fits: Do not throw error when encountering insufficient data for fittingDaniel Friesel-0/+8
2019-02-06protocol benchmarks: Accessors for serialized data size availabilityDaniel Friesel-0/+32
2019-02-06Turn Benchmark class into a context managerDaniel Friesel-30/+52
2019-02-05move flatten to utilsDaniel Friesel-8/+9
2019-02-05add ipython prelude for energy modelingDaniel Friesel-0/+13
2019-02-05add protocol benchmark classes for protocolmodelingDaniel Friesel-0/+1225
2019-02-05ParamStats: document return ratio edge caseDaniel Friesel-1/+25
2019-02-05compute_param_statistics: Warn when encountering useless dataDaniel Friesel-1/+10
2019-02-05ParamStats: Correctly handle data with stddev == 0Daniel Friesel-2/+2
2019-02-05plotter: Simplify boxplot signatureDaniel Friesel-16/+16
2019-02-05move float_or_nan to utilsDaniel Friesel-17/+9
2019-02-05dokuDaniel Friesel-0/+6
2019-02-05plotter: Add generic plot_attribute function for by_* boxplotsDaniel Friesel-0/+16
2019-02-05data_parameters: distinguish num_objects by type (int/float/str/tbd)Daniel Friesel-5/+18
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