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import json
import numpy as np
import re
import logging
arg_support_enabled = True
logger = logging.getLogger(__name__)
class NpEncoder(json.JSONEncoder):
def default(self, obj):
if isinstance(obj, np.integer):
return int(obj)
elif isinstance(obj, np.floating):
return float(obj)
elif isinstance(obj, np.ndarray):
return obj.tolist()
else:
return super(NpEncoder, self).default(obj)
def running_mean(x: np.ndarray, N: int) -> np.ndarray:
"""
Compute `N` elements wide running average over `x`.
:param x: 1-Dimensional NumPy array
:param N: how many items to average
"""
# FIXME np.insert(x, 0, [x[0] for i in range(N/2)])
# FIXME np.insert(x, -1, [x[-1] for i in range(N/2)])
# (dabei ungerade N beachten)
cumsum = np.cumsum(np.insert(x, 0, 0))
return (cumsum[N:] - cumsum[:-N]) / N
def human_readable(value, unit):
for prefix, factor in (
("p", 1e-12),
("n", 1e-9),
(u"µ", 1e-6),
("m", 1e-3),
("", 1),
("k", 1e3),
):
if value < 1e3 * factor:
return "{:.2f} {}{}".format(value * (1 / factor), prefix, unit)
return "{:.2f} {}".format(value, unit)
def is_numeric(n):
"""Check if `n` is numeric (i.e., it can be converted to float)."""
if n is None:
return False
try:
float(n)
return True
except ValueError:
return False
def is_power_of_two(n):
"""Check if `n` is a power of two (1, 2, 4, 8, 16, ...)."""
return n > 0 and (n & (n - 1)) == 0
def float_or_nan(n):
"""Convert `n` to float (if numeric) or NaN."""
if n is None:
return np.nan
try:
return float(n)
except ValueError:
return np.nan
def soft_cast_int(n):
"""
Convert `n` to int (if numeric) or return it as-is.
If `n` is empty, returns None.
If `n` is not numeric, it is left unchanged.
"""
if n is None or n == "":
return None
try:
return int(n)
except ValueError:
return n
def soft_cast_float(n):
"""
Convert `n` to float (if numeric) or return it as-is.
If `n` is empty, returns None.
If `n` is not numeric, it is left unchanged.
"""
if n is None or n == "":
return None
try:
return float(n)
except ValueError:
return n
def flatten(somelist):
"""
Flatten a list.
Example: flatten([[1, 2], [3], [4, 5]]) -> [1, 2, 3, 4, 5]
"""
return [item for sublist in somelist for item in sublist]
def parse_conf_str(conf_str):
"""
Parse a configuration string `k1=v1,k2=v2`... and return a dict `{'k1': v1, 'k2': v2}`...
Values are casted to float if possible and kept as-is otherwise.
"""
conf_dict = dict()
for option in conf_str.split(","):
key, value = option.split("=")
conf_dict[key] = soft_cast_float(value)
return conf_dict
def remove_index_from_tuple(parameters, index):
"""
Remove the element at `index` from tuple `parameters`.
:param parameters: tuple
:param index: index of element which is to be removed
:returns: parameters tuple without the element at index
"""
return (*parameters[:index], *parameters[index + 1 :])
def param_slice_eq(a, b, index):
"""
Check if by_param keys a and b are identical, ignoring the parameter at index.
parameters:
a, b -- (state/transition name, [parameter0 value, parameter1 value, ...])
index -- parameter index to ignore (0 -> parameter0, 1 -> parameter1, etc.)
Returns True iff a and b have the same state/transition name, and all
parameters at positions != index are identical.
example:
('foo', [1, 4]), ('foo', [2, 4]), 0 -> True
('foo', [1, 4]), ('foo', [2, 4]), 1 -> False
"""
if (*a[1][:index], *a[1][index + 1 :]) == (*b[1][:index], *b[1][index + 1 :]) and a[
0
] == b[0]:
return True
return False
def match_parameter_values(input_param: dict, match_param: dict):
"""
Check whether one of the paramaters in `input_param` has the same value in `match_param`.
:param input_param: parameter dict of a state/transition/... measurement
:param match_param: parameter value filter
:returns: True if for all parameters k in match_param: input_param[k] == match_param[k], or if match_param is None.
"""
if match_param is None:
return True
for k, v in match_param.items():
if k in input_param and input_param[k] != v:
return False
return True
def by_name_to_by_param(by_name: dict):
"""
Convert aggregation by name to aggregation by name and parameter values.
"""
by_param = dict()
for name in by_name.keys():
for i, parameters in enumerate(by_name[name]["param"]):
param_key = (name, tuple(parameters))
if param_key not in by_param:
by_param[param_key] = dict()
for key in by_name[name].keys():
by_param[param_key][key] = list()
by_param[param_key]["attributes"] = by_name[name]["attributes"]
# special case for PTA models
if "isa" in by_name[name]:
by_param[param_key]["isa"] = by_name[name]["isa"]
for attribute in by_name[name]["attributes"]:
by_param[param_key][attribute].append(by_name[name][attribute][i])
# Required for match_parameter_valuse in _try_fits
by_param[param_key]["param"].append(by_name[name]["param"][i])
return by_param
def filter_aggregate_by_param(aggregate, parameters, parameter_filter):
"""
Remove entries which do not have certain parameter values from `aggregate`.
:param aggregate: aggregated measurement data, must be a dict conforming to
aggregate[state or transition name]['param'] = (first parameter value, second parameter value, ...)
and
aggregate[state or transition name]['attributes'] = [list of keys with measurement data, e.g. 'power' or 'duration']
:param parameters: list of parameters, used to map parameter index to parameter name. parameters=['foo', ...] means 'foo' is the first parameter
:param parameter_filter: [[name, value], [name, value], ...] list of parameter values to keep, all others are removed. Values refer to normalizad parameter data.
"""
for param_name_and_value in parameter_filter:
param_index = parameters.index(param_name_and_value[0])
param_value = soft_cast_int(param_name_and_value[1])
names_to_remove = set()
for name in aggregate.keys():
indices_to_keep = list(
map(lambda x: x[param_index] == param_value, aggregate[name]["param"])
)
aggregate[name]["param"] = list(
map(
lambda iv: iv[1],
filter(
lambda iv: indices_to_keep[iv[0]],
enumerate(aggregate[name]["param"]),
),
)
)
if len(indices_to_keep) == 0:
logger.debug("??? {}->{}".format(parameter_filter, name))
names_to_remove.add(name)
else:
for attribute in aggregate[name]["attributes"]:
aggregate[name][attribute] = aggregate[name][attribute][
indices_to_keep
]
if len(aggregate[name][attribute]) == 0:
names_to_remove.add(name)
for name in names_to_remove:
aggregate.pop(name)
class OptionalTimingAnalysis:
def __init__(self, enabled=True):
self.enabled = enabled
self.wrapped_lines = list()
self.index = 1
def get_header(self):
ret = ""
if self.enabled:
ret += "#define TIMEIT(index, functioncall) "
ret += "counter.start(); "
ret += "functioncall; "
ret += "counter.stop();"
ret += 'kout << endl << index << " :: " << counter.value << "/" << counter.overflow << endl;\n'
return ret
def wrap_codeblock(self, codeblock):
if not self.enabled:
return codeblock
lines = codeblock.split("\n")
ret = list()
for line in lines:
if re.fullmatch(".+;", line):
ret.append("TIMEIT( {:d}, {} )".format(self.index, line))
self.wrapped_lines.append(line)
self.index += 1
else:
ret.append(line)
return "\n".join(ret)
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