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Diffstat (limited to 'NW/baselines/gpu/README')
| -rw-r--r-- | NW/baselines/gpu/README | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/NW/baselines/gpu/README b/NW/baselines/gpu/README new file mode 100644 index 0000000..00d3695 --- /dev/null +++ b/NW/baselines/gpu/README @@ -0,0 +1,23 @@ +Needleman-Wunsch (NW) + +Compilation instructions + + make + +Execution instructions + + ./needle 46080 10 + + +Note: This program generate two sequences randomly. Please specify your own sequences for different uses. + At the current stage, the program only supports two sequences with the same lengh, which can be divided by 16. +Usage: needle 32 10 + 32 //the length of both sequences + 10 //penalty value + +******Adjustable work group size***** +RD_WG_SIZE_0 or RD_WG_SIZE_0_0 + +USAGE: +make clean +make KERNEL_DIM="-DRD_WG_SIZE_0=16" |